Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | BvMPK_RS03225 | Not Available | Negative | 756560 - 757900 | 50611.4 |
| hypothetical protein | BvMPK_RS03230 | Not Available | Negative | 757915 - 758319 | 15197.6 |
| orotate phosphoribosyltransferase | BvMPK_RS03235 | Not Available | Negative | 758417 - 759055 | 23412.4 |
| comf family protein | BvMPK_RS03240 | Not Available | Negative | 759154 - 759849 | 26038.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03245 | Not Available | Negative | 759830 - 760311 | 18130.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | BvMPK_RS03250 | Not Available | Negative | 760313 - 761149 | 31852.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | BvMPK_RS03255 | Not Available | Positive | 761194 - 762246 | 39628.4 |
| duf6242 domain-containing protein | BvMPK_RS03260 | Not Available | Positive | 762374 - 763771 | 52324.1 |
| isoprenyl transferase | BvMPK_RS03265 | Not Available | Positive | 763805 - 764536 | 28066.4 |
| outer membrane protein assembly factor bama | BvMPK_RS03270 | Not Available | Positive | 764548 - 767190 | 100747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

