Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | BvMPK_RS03080 | Not Available | Positive | 717256 - 718065 | 30811.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03085 | Not Available | Positive | 718085 - 720416 | 85071.0 |
| glycoside hydrolase family 28 protein | BvMPK_RS03090 | Not Available | Positive | 720442 - 721854 | 52158.1 |
| gh92 family glycosyl hydrolase | BvMPK_RS03095 | Not Available | Positive | 721857 - 724136 | 86221.0 |
| histidine-type phosphatase | BvMPK_RS03100 | Not Available | Positive | 724143 - 725882 | 66792.9 |
| hybrid sensor histidine kinase/response regulator transcription factor | BvMPK_RS03105 | Not Available | Negative | 726130 - 730170 | 153002.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03110 | Not Available | Positive | 730384 - 731881 | 53978.3 |
| tonb-dependent receptor | BvMPK_RS03115 | Not Available | Positive | 731904 - 734942 | 112358.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS03120 | Not Available | Positive | 734960 - 736618 | 63057.9 |
| glycoside hydrolase | BvMPK_RS03125 | Not Available | Positive | 736735 - 738333 | 59513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

