Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | BvMPK_RS02495 | Not Available | Positive | 588466 - 588762 | 11511.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21510 | Not Available | Positive | 589101 - 589343 | 9031.26 |
| hypothetical protein | BvMPK_RS02500 | Not Available | Negative | 589441 - 589707 | 10104.1 |
| porin | BvMPK_RS02505 | Not Available | Negative | 589659 - 590519 | 32436.9 |
| s9 family peptidase | BvMPK_RS02510 | Not Available | Negative | 590753 - 591790 | 39546.7 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS02515 | Not Available | Negative | 591823 - 593265 | 53773.6 |
| tonb-dependent receptor | BvMPK_RS02520 | Not Available | Negative | 593296 - 596592 | 122238.0 |
| fecr family protein | BvMPK_RS02525 | Not Available | Negative | 596750 - 597748 | 38187.8 |
| rna polymerase sigma-70 factor | BvMPK_RS02530 | Not Available | Negative | 597809 - 598399 | 23553.4 |
| alpha-galactosidase | BvMPK_RS02535 | Not Available | Negative | 599295 - 601451 | 82531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

