Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | BvMPK_RS21115 | Not Available | Positive | 5084905 - 5086503 | 61544.2 |
| is21-like element helper atpase istb | BvMPK_RS21120 | Not Available | Positive | 5086515 - 5087270 | 28940.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21125 | Not Available | Negative | 5087360 - 5088190 | 30848.3 |
| phosphatase pap2 family protein | BvMPK_RS21130 | Not Available | Negative | 5088429 - 5089205 | 29189.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21135 | Not Available | Negative | 5089534 - 5091930 | 90413.3 |
| alpha-l-fucosidase | BvMPK_RS21140 | Not Available | Negative | 5092177 - 5094036 | 69765.9 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BvMPK_RS21145 | Not Available | Negative | 5094054 - 5097113 | 116606.0 |
| glycoside hydrolase family 20 protein | BvMPK_RS21150 | Not Available | Negative | 5097122 - 5099437 | 87314.9 |
| sulfatase | BvMPK_RS21155 | Not Available | Negative | 5099455 - 5101047 | 62253.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22435 | Not Available | Positive | 5101030 - 5101219 | 7636.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

