Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase 115 family protein | BvMPK_RS21070 | Not Available | Negative | 5067942 - 5070842 | 110181.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS21075 | Not Available | Negative | 5070955 - 5072631 | 63448.6 |
| tonb-dependent receptor | BvMPK_RS21080 | Not Available | Negative | 5072636 - 5075602 | 110492.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | BvMPK_RS21085 | Not Available | Positive | 5075827 - 5079975 | 157559.0 |
| radc family protein | BvMPK_RS21090 | Not Available | Negative | 5080096 - 5080785 | 25617.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21095 | Not Available | Negative | 5080859 - 5081846 | 36180.4 |
| elongation factor p | BvMPK_RS21100 | Not Available | Negative | 5081948 - 5082514 | 21126.5 |
| 50s ribosomal protein l34 | BvMPK_RS22430 | Not Available | Positive | 5082717 - 5082872 | 6019.34 |
| anaerobic sulfatase-maturation protein | BvMPK_RS21105 | Not Available | Negative | 5083051 - 5084286 | 48023.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21110 | Not Available | Negative | 5084480 - 5084806 | 12553.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

