Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| discoidin domain-containing protein | BvMPK_RS20965 | Not Available | Negative | 5036874 - 5037764 | 33030.6 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS20970 | Not Available | Negative | 5037799 - 5039484 | 64588.6 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS20975 | Not Available | Negative | 5039511 - 5042528 | 112653.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS20980 | Not Available | Negative | 5042563 - 5044455 | 72415.0 |
| tonb-dependent receptor | BvMPK_RS20985 | Not Available | Negative | 5044470 - 5047598 | 116750.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | BvMPK_RS20990 | Not Available | Positive | 5047956 - 5051912 | 150804.0 |
| duf3810 domain-containing protein | BvMPK_RS20995 | Not Available | Negative | 5052121 - 5053161 | 40955.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22425 | Not Available | Negative | 5053303 - 5055622 | 80019.4 |
| bnr repeat-containing protein | BvMPK_RS21010 | Not Available | Negative | 5055714 - 5056988 | 49248.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BvMPK_RS21015 | Not Available | Negative | 5057411 - 5058709 | 48368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

