Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS22725 | Not Available | Negative | 4962826 - 4963047 | 8364.95 |
| dna helicase recq | BvMPK_RS20670 | Not Available | Negative | 4963184 - 4965364 | 81679.6 |
| atp-dependent clp protease atp-binding subunit clpx | BvMPK_RS20675 | Not Available | Negative | 4965522 - 4966772 | 46679.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | BvMPK_RS20680 | Not Available | Negative | 4966896 - 4967567 | 24864.8 |
| trigger factor | BvMPK_RS20685 | Not Available | Negative | 4967748 - 4969103 | 51572.8 |
| rna-binding protein | BvMPK_RS20690 | Not Available | Positive | 4969485 - 4969730 | 9049.81 |
| lps export abc transporter atp-binding protein | BvMPK_RS20695 | Not Available | Negative | 4969805 - 4970626 | 31018.3 |
| abc transporter permease | BvMPK_RS20700 | Not Available | Positive | 4970755 - 4971498 | 27369.4 |
| abc transporter atp-binding protein | BvMPK_RS20705 | Not Available | Positive | 4971495 - 4972259 | 28911.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20710 | Not Available | Negative | 4972338 - 4973652 | 47236.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

