Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS20465 | Not Available | Positive | 4909688 - 4911229 | 59412.4 |
| sugar-binding domain-containing protein | BvMPK_RS20470 | Not Available | Positive | 4911328 - 4913775 | 92761.4 |
| family 20 glycosylhydrolase | BvMPK_RS20475 | Not Available | Positive | 4913772 - 4915853 | 80552.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20480 | Not Available | Positive | 4915915 - 4918592 | 98730.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20485 | Not Available | Positive | 4918707 - 4920304 | 57965.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20490 | Not Available | Positive | 4920586 - 4922137 | 58816.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20495 | Not Available | Positive | 4922397 - 4922733 | 12250.4 |
| dead/deah box helicase | BvMPK_RS20505 | Not Available | Negative | 4923181 - 4924485 | 48294.5 |
| pqq-binding-like beta-propeller repeat protein | BvMPK_RS20510 | Not Available | Negative | 4924689 - 4927145 | 89617.5 |
| endonuclease/exonuclease/phosphatase family protein | BvMPK_RS20515 | Not Available | Negative | 4927173 - 4928111 | 34976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

