Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator transcription factor | BvMPK_RS20370 | Not Available | Negative | 4878495 - 4882817 | 165156.0 |
| zinc metallopeptidase | BvMPK_RS20375 | Not Available | Negative | 4883031 - 4883711 | 24715.3 |
| helix-turn-helix domain-containing protein | BvMPK_RS20380 | Not Available | Positive | 4883923 - 4884825 | 35311.8 |
| hypothetical protein | BvMPK_RS20385 | Not Available | Negative | 4884930 - 4885841 | 33742.1 |
| bama/tama family outer membrane protein | BvMPK_RS20390 | Not Available | Negative | 4885976 - 4888333 | 89052.7 |
| translocation/assembly module tamb domain-containing protein | BvMPK_RS20395 | Not Available | Negative | 4888330 - 4892979 | 171841.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22410 | Not Available | Positive | 4893364 - 4893591 | 8906.85 |
| peptidylprolyl isomerase | BvMPK_RS20400 | Not Available | Positive | 4893690 - 4894535 | 31477.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20405 | Not Available | Positive | 4894548 - 4895791 | 46245.8 |
| mate family efflux transporter | BvMPK_RS20410 | Not Available | Positive | 4895885 - 4897195 | 48593.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

