Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | BvMPK_RS20320 | Not Available | Negative | 4866726 - 4868090 | 50299.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20325 | Not Available | Negative | 4868249 - 4869096 | 31737.0 |
| grp family sugar transporter | BvMPK_RS20330 | Not Available | Negative | 4869104 - 4870120 | 35979.8 |
| l-fucose/l-arabinose isomerase family protein | BvMPK_RS20335 | Not Available | Negative | 4870133 - 4871557 | 52346.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20340 | Not Available | Negative | 4871591 - 4873085 | 54978.7 |
| transketolase c-terminal domain-containing protein | BvMPK_RS20345 | Not Available | Negative | 4873111 - 4874046 | 33526.4 |
| transketolase | BvMPK_RS20350 | Not Available | Negative | 4874036 - 4874881 | 31469.7 |
| deor/glpr family dna-binding transcription regulator | BvMPK_RS20355 | Not Available | Negative | 4875223 - 4875978 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BvMPK_RS20360 | Not Available | Negative | 4875990 - 4876604 | 22225.8 |
| duf5060 domain-containing protein | BvMPK_RS20365 | Not Available | Negative | 4876726 - 4878330 | 61912.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

