Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclodeaminase/cyclohydrolase family protein | BvMPK_RS20170 | Not Available | Positive | 4836308 - 4836931 | 22967.8 |
| histidine ammonia-lyase | BvMPK_RS20175 | Not Available | Positive | 4836966 - 4838462 | 55208.0 |
| nudix domain-containing protein | BvMPK_RS20180 | Not Available | Positive | 4838581 - 4839081 | 19016.2 |
| hypothetical protein | BvMPK_RS20185 | Not Available | Negative | 4839808 - 4840014 | 7690.22 |
| dj-1/pfpi family protein | BvMPK_RS20190 | Not Available | Negative | 4840118 - 4840735 | 22787.4 |
| duf3795 domain-containing protein | BvMPK_RS20195 | Not Available | Negative | 4840738 - 4841082 | 13108.9 |
| zinc ribbon domain-containing protein | BvMPK_RS20200 | Not Available | Negative | 4841088 - 4841768 | 26137.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22720 | Not Available | Negative | 4842114 - 4842303 | 7062.51 |
| hypothetical protein | BvMPK_RS20205 | Not Available | Negative | 4842273 - 4842476 | 8126.12 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20210 | Not Available | Positive | 4842523 - 4842907 | 13973.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

