Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | BvMPK_RS20120 | Not Available | Positive | 4825423 - 4827129 | 63864.0 |
| histidine decarboxylase, pyruvoyl type | BvMPK_RS20125 | Not Available | Positive | 4827588 - 4828196 | 22182.6 |
| paai family thioesterase | BvMPK_RS20130 | Not Available | Negative | 4828276 - 4828686 | 14751.8 |
| duf2027 domain-containing protein | BvMPK_RS20135 | Not Available | Negative | 4828714 - 4829802 | 41096.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BvMPK_RS20140 | Not Available | Positive | 4829867 - 4831084 | 46273.2 |
| urocanate hydratase | BvMPK_RS20150 | Not Available | Positive | 4831610 - 4833607 | 74543.1 |
| hypothetical protein | BvMPK_RS22400 | Not Available | Positive | 4833629 - 4833742 | 4348.15 |
| glutamate formimidoyltransferase | BvMPK_RS20155 | Not Available | Positive | 4833690 - 4834592 | 33359.4 |
| gxxexxy protein | BvMPK_RS20160 | Not Available | Positive | 4834610 - 4834996 | 15150.3 |
| imidazolonepropionase | BvMPK_RS20165 | Not Available | Positive | 4835043 - 4836287 | 44903.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

