Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BvMPK_RS20020 | Not Available | Negative | 4793894 - 4797310 | 126356.0 |
| fecr family protein | BvMPK_RS20025 | Not Available | Negative | 4797461 - 4798438 | 38231.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20030 | Not Available | Negative | 4798567 - 4799147 | 21965.9 |
| abc-f family atp-binding cassette domain-containing protein | BvMPK_RS20035 | Not Available | Negative | 4799187 - 4800821 | 61961.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20040 | Not Available | Negative | 4800936 - 4802605 | 60271.6 |
| methylmalonyl-coa mutase small subunit | BvMPK_RS20045 | Not Available | Positive | 4802950 - 4804800 | 68223.9 |
| methylmalonyl-coa mutase | BvMPK_RS20050 | Not Available | Positive | 4804810 - 4806960 | 79111.7 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS20055 | Not Available | Negative | 4807283 - 4808344 | 39297.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS20060 | Not Available | Negative | 4808358 - 4810354 | 74136.6 |
| ykva family protein | BvMPK_RS20065 | Not Available | Negative | 4810576 - 4810938 | 13960.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

