Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase activating protein | BvMPK_RS01960 | Not Available | Positive | 482872 - 483330 | 17410.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01965 | Not Available | Negative | 483903 - 485245 | 50071.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BvMPK_RS01970 | Not Available | Negative | 485302 - 486450 | 42392.3 |
| m23 family metallopeptidase | BvMPK_RS01975 | Not Available | Negative | 486458 - 487315 | 32093.4 |
| ribosome maturation factor rimm | BvMPK_RS01980 | Not Available | Negative | 487334 - 487852 | 19831.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | BvMPK_RS01985 | Not Available | Negative | 487864 - 489168 | 47616.1 |
| duf4290 domain-containing protein | BvMPK_RS01990 | Not Available | Negative | 489187 - 489813 | 24903.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | BvMPK_RS01995 | Not Available | Negative | 489860 - 490549 | 25285.7 |
| yicc/yloc family endoribonuclease | BvMPK_RS02000 | Not Available | Positive | 490644 - 491519 | 33867.7 |
| guanylate kinase | BvMPK_RS02005 | Not Available | Positive | 491566 - 492135 | 21367.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

