Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | BvMPK_RS19570 | Not Available | Positive | 4701096 - 4702082 | 35945.9 |
| abc transporter permease | BvMPK_RS19575 | Not Available | Positive | 4702089 - 4703264 | 44285.0 |
| abc transporter permease | BvMPK_RS19580 | Not Available | Positive | 4703279 - 4704529 | 47511.7 |
| copper resistance protein nlpe | BvMPK_RS19585 | Not Available | Positive | 4704565 - 4704993 | 15888.7 |
| blai/meci/copy family transcriptional regulator | BvMPK_RS19590 | Not Available | Positive | 4705179 - 4705544 | 14087.0 |
| m56 family metallopeptidase | BvMPK_RS19595 | Not Available | Positive | 4705567 - 4707417 | 69623.8 |
| mrp/nbp35 family atp-binding protein | BvMPK_RS19600 | Not Available | Negative | 4707485 - 4708585 | 39587.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | BvMPK_RS19605 | Not Available | Negative | 4708596 - 4709354 | 29773.6 |
| duf975 family protein | BvMPK_RS19610 | Not Available | Negative | 4709477 - 4710103 | 23264.0 |
| branched-chain amino acid aminotransferase | BvMPK_RS19615 | Not Available | Negative | 4710121 - 4711140 | 37876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

