Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS19470 | Not Available | Negative | 4672787 - 4674415 | 62461.3 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS19475 | Not Available | Negative | 4674428 - 4676551 | 79053.0 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS19480 | Not Available | Negative | 4676515 - 4677729 | 43271.1 |
| fecr family protein | BvMPK_RS19485 | Not Available | Negative | 4677967 - 4678962 | 38534.4 |
| rna polymerase sigma-70 factor | BvMPK_RS19490 | Not Available | Negative | 4679021 - 4679629 | 24004.1 |
| nadp-dependent malic enzyme | BvMPK_RS19495 | Not Available | Positive | 4680281 - 4682569 | 84369.3 |
| hypothetical protein | BvMPK_RS19500 | Not Available | Positive | 4682694 - 4682876 | 6713.74 |
| nadp-specific glutamate dehydrogenase | BvMPK_RS19505 | Not Available | Positive | 4683032 - 4684366 | 48958.7 |
| pcmd domain-containing protein | BvMPK_RS19510 | Not Available | Positive | 4684522 - 4685670 | 42381.6 |
| porin family protein | BvMPK_RS19515 | Not Available | Positive | 4685679 - 4686455 | 29116.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

