Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4980 domain-containing protein | BvMPK_RS01910 | Not Available | Negative | 469007 - 470890 | 70929.3 |
| tonb-dependent receptor | BvMPK_RS01915 | Not Available | Negative | 471039 - 473357 | 86968.6 |
| hu family dna-binding protein | BvMPK_RS01920 | Not Available | Positive | 473993 - 474604 | 23004.6 |
| prolipoprotein diacylglyceryl transferase | BvMPK_RS01925 | Not Available | Negative | 474645 - 475451 | 31284.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01930 | Not Available | Negative | 475557 - 476455 | 32344.7 |
| holliday junction branch migration protein ruva | BvMPK_RS01935 | Not Available | Positive | 476631 - 477224 | 21141.8 |
| hypothetical protein | BvMPK_RS01940 | Not Available | Negative | 477312 - 478136 | 30836.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01945 | Not Available | Positive | 478154 - 479655 | 55527.0 |
| paqr family membrane homeostasis protein trha | BvMPK_RS01950 | Not Available | Positive | 479660 - 480295 | 23650.2 |
| anaerobic ribonucleoside triphosphate reductase | BvMPK_RS01955 | Not Available | Positive | 480590 - 482866 | 86287.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

