Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS00155 | Not Available | Negative | 45752 - 46959 | 43698.9 |
| gnat family n-acetyltransferase | BvMPK_RS00160 | Not Available | Negative | 47060 - 47617 | 20661.0 |
| arginine repressor | BvMPK_RS00165 | Not Available | Negative | 47640 - 48116 | 17529.3 |
| rhamnulokinase | BvMPK_RS00170 | Not Available | Positive | 48423 - 49901 | 55006.8 |
| l-rhamnose isomerase | BvMPK_RS00175 | Not Available | Positive | 49941 - 51197 | 47536.4 |
| l-rhamnose/proton symporter rhat | BvMPK_RS00180 | Not Available | Positive | 51290 - 52309 | 36173.2 |
| rhamnulose-1-phosphate aldolase | BvMPK_RS00185 | Not Available | Positive | 52395 - 53204 | 30253.7 |
| duf4251 domain-containing protein | BvMPK_RS00190 | Not Available | Positive | 53413 - 53910 | 18492.1 |
| is982 family transposase | BvMPK_RS00195 | Not Available | Negative | 53940 - 54845 | 35030.2 |
| right-handed parallel beta-helix repeat-containing protein | BvMPK_RS00200 | Not Available | Negative | 55054 - 56568 | 55846.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

