Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | BvMPK_RS19280 | Not Available | Positive | 4620422 - 4621450 | 39153.0 |
| Trna-leu | Not Available | Not Available | Positive | 4621519 - 4621600 | Not Available |
| tim-barrel domain-containing protein | BvMPK_RS19290 | Not Available | Negative | 4621701 - 4624154 | 93567.2 |
| glycoside hydrolase family 97 protein | BvMPK_RS19295 | Not Available | Negative | 4624329 - 4626212 | 71898.3 |
| l-rhamnose mutarotase | BvMPK_RS19300 | Not Available | Negative | 4626284 - 4626667 | 15479.7 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS19305 | Not Available | Negative | 4626690 - 4628378 | 63978.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS19310 | Not Available | Negative | 4628404 - 4631470 | 110218.0 |
| alpha-l-fucosidase | BvMPK_RS19315 | Not Available | Negative | 4631561 - 4633207 | 62680.8 |
| arac family transcriptional regulator | BvMPK_RS19320 | Not Available | Positive | 4633449 - 4634309 | 33567.5 |
| aldo/keto reductase | BvMPK_RS19325 | Not Available | Positive | 4634427 - 4635359 | 34845.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

