Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | BvMPK_RS19225 | Not Available | Positive | 4606915 - 4608309 | 51593.0 |
| fimb/mfa2 family fimbrial subunit | BvMPK_RS19230 | Not Available | Positive | 4608392 - 4609345 | 35162.6 |
| abc transporter atp-binding protein | BvMPK_RS19235 | Not Available | Negative | 4609357 - 4610016 | 23931.2 |
| thif family adenylyltransferase | BvMPK_RS19240 | Not Available | Negative | 4610019 - 4610741 | 27062.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS19245 | Not Available | Negative | 4610728 - 4612874 | 80124.1 |
| aspartate-semialdehyde dehydrogenase | BvMPK_RS19250 | Not Available | Positive | 4613040 - 4614050 | 37239.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | BvMPK_RS19260 | Not Available | Negative | 4614527 - 4615168 | 23289.7 |
| glycine--trna ligase | BvMPK_RS19265 | Not Available | Negative | 4615179 - 4616720 | 59436.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS19270 | Not Available | Positive | 4616872 - 4619564 | 98677.4 |
| duf3316 domain-containing protein | BvMPK_RS19275 | Not Available | Positive | 4619568 - 4620413 | 31914.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

