Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS19135 | Not Available | Negative | 4580967 - 4583320 | 87795.3 |
| sugar-binding domain-containing protein | BvMPK_RS19140 | Not Available | Positive | 4583532 - 4586399 | 110104.0 |
| rhamnogalacturonan acetylesterase | BvMPK_RS19145 | Not Available | Positive | 4586418 - 4587692 | 47762.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS19150 | Not Available | Positive | 4587710 - 4589192 | 53657.2 |
| duf4450 domain-containing protein | BvMPK_RS19155 | Not Available | Positive | 4589170 - 4589868 | 25996.3 |
| hypothetical protein | BvMPK_RS19160 | Not Available | Positive | 4589865 - 4590668 | 30936.2 |
| glycoside hydrolase family 28 protein | BvMPK_RS19165 | Not Available | Positive | 4590684 - 4592108 | 52175.9 |
| glycosyl hydrolase | BvMPK_RS19170 | Not Available | Positive | 4592125 - 4594887 | 104053.0 |
| left-handed beta-roll domain-containing protein | BvMPK_RS22360 | Not Available | Negative | 4595241 - 4595363 | 4281.98 |
| isoaspartyl peptidase/l-asparaginase family protein | BvMPK_RS19175 | Not Available | Negative | 4595838 - 4596824 | 34931.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

