Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS18985 | Not Available | Negative | 4524029 - 4526269 | 84250.7 |
| pectate lyase | BvMPK_RS18990 | Not Available | Negative | 4526278 - 4527786 | 57108.4 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS18995 | Not Available | Negative | 4527879 - 4529756 | 70189.5 |
| tonb-dependent receptor | BvMPK_RS19000 | Not Available | Negative | 4529775 - 4533314 | 130848.0 |
| fecr family protein | BvMPK_RS19005 | Not Available | Negative | 4533432 - 4534451 | 39133.9 |
| rna polymerase sigma-70 factor | BvMPK_RS19010 | Not Available | Positive | 4534588 - 4535169 | 23075.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22350 | Not Available | Negative | 4535885 - 4537037 | 42809.6 |
| hypothetical protein | BvMPK_RS19025 | Not Available | Positive | 4537398 - 4537589 | 7652.25 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22355 | Not Available | Negative | 4537571 - 4537859 | 10503.7 |
| is982 family transposase | BvMPK_RS19035 | Not Available | Positive | 4538132 - 4539037 | 35030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

