Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS22700 | Not Available | Negative | 4497992 - 4498121 | 4583.61 |
| Trna-met | Not Available | Not Available | Positive | 4498305 - 4498378 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4498437 - 4498513 | Not Available |
| start-like domain-containing protein | BvMPK_RS18905 | Not Available | Positive | 4498717 - 4499103 | 15298.1 |
| lptf/lptg family permease | BvMPK_RS18910 | Not Available | Positive | 4499187 - 4501085 | 72557.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | BvMPK_RS18915 | Not Available | Positive | 4501088 - 4502302 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | BvMPK_RS18920 | Not Available | Positive | 4502427 - 4503620 | 43014.4 |
| 4fe-4s binding protein | BvMPK_RS22345 | Not Available | Negative | 4503799 - 4503966 | 5717.65 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | BvMPK_RS18925 | Not Available | Negative | 4504069 - 4507062 | 112147.0 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | BvMPK_RS18930 | Not Available | Negative | 4507105 - 4507950 | 31438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

