Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | BvMPK_RS01860 | Not Available | Negative | 457624 - 458739 | 40190.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01865 | Not Available | Positive | 458886 - 459718 | 32095.6 |
| class ii fructose-bisphosphate aldolase | BvMPK_RS01870 | Not Available | Negative | 459781 - 460785 | 36460.6 |
| type b 50s ribosomal protein l31 | BvMPK_RS01875 | Not Available | Positive | 461116 - 461370 | 9656.59 |
| duf3256 family protein | BvMPK_RS01880 | Not Available | Negative | 461455 - 462102 | 24291.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01885 | Not Available | Positive | 462216 - 463512 | 47488.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01890 | Not Available | Positive | 463524 - 463951 | 15572.0 |
| substrate-binding domain-containing protein | BvMPK_RS01895 | Not Available | Negative | 463994 - 466720 | 103092.0 |
| carbohydrate kinase | BvMPK_RS01900 | Not Available | Negative | 466916 - 467803 | 32432.2 |
| mfs transporter | BvMPK_RS01905 | Not Available | Negative | 467831 - 468991 | 41814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

