Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BvMPK_RS18845 | Not Available | Positive | 4485657 - 4486559 | 35088.3 |
| alpha-l-fucosidase | BvMPK_RS18850 | Not Available | Positive | 4486568 - 4488607 | 76756.4 |
| hypothetical protein | BvMPK_RS18855 | Not Available | Negative | 4488785 - 4489558 | 29814.5 |
| tlpa disulfide reductase family protein | BvMPK_RS18860 | Not Available | Negative | 4489680 - 4491788 | 80293.8 |
| peroxiredoxin | BvMPK_RS18865 | Not Available | Negative | 4491811 - 4493001 | 44913.9 |
| cdc27 family protein | BvMPK_RS18870 | Not Available | Negative | 4493032 - 4494375 | 51695.6 |
| m56 family metallopeptidase | BvMPK_RS18875 | Not Available | Negative | 4494386 - 4496272 | 70524.8 |
| blai/meci/copy family transcriptional regulator | BvMPK_RS18880 | Not Available | Negative | 4496306 - 4496668 | 14012.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS18885 | Not Available | Negative | 4496879 - 4497091 | 7873.46 |
| hypothetical protein | BvMPK_RS18890 | Not Available | Positive | 4497496 - 4497768 | 9528.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

