Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family outer membrane lipoprotein nanu | BvMPK_RS18070 | Not Available | Negative | 4277862 - 4279364 | 57014.6 |
| tonb-dependent receptor | BvMPK_RS18075 | Not Available | Negative | 4279383 - 4282658 | 121669.0 |
| Trna-arg | Not Available | Not Available | Positive | 4282967 - 4283041 | Not Available |
| aspartate--ammonia ligase | BvMPK_RS18085 | Not Available | Positive | 4283244 - 4284284 | 39770.2 |
| uracil-dna glycosylase | BvMPK_RS18090 | Not Available | Positive | 4284402 - 4285064 | 24957.5 |
| putative lps assembly protein lptd | BvMPK_RS18095 | Not Available | Negative | 4285141 - 4287876 | 103814.0 |
| hd domain-containing protein | BvMPK_RS18100 | Not Available | Negative | 4287967 - 4288503 | 20327.6 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | BvMPK_RS18105 | Not Available | Positive | 4288557 - 4289717 | 43551.8 |
| s26 family signal peptidase | BvMPK_RS18110 | Not Available | Negative | 4289745 - 4290212 | 18041.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS18115 | Not Available | Negative | 4290181 - 4291094 | 33938.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

