Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | BvMPK_RS17975 | Not Available | Positive | 4247302 - 4250427 | 115862.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS17980 | Not Available | Positive | 4250460 - 4251837 | 48735.5 |
| hu family dna-binding protein | BvMPK_RS17985 | Not Available | Negative | 4252052 - 4252756 | 26967.6 |
| hypothetical protein | BvMPK_RS22690 | Not Available | Negative | 4252722 - 4252841 | 4138.87 |
| hypothetical protein | BvMPK_RS17990 | Not Available | Positive | 4253161 - 4253832 | 25577.6 |
| rna polymerase sigma factor | BvMPK_RS17995 | Not Available | Positive | 4253984 - 4254457 | 19000.9 |
| hypothetical protein | BvMPK_RS18000 | Not Available | Positive | 4254470 - 4255048 | 22985.1 |
| hypothetical protein | BvMPK_RS18005 | Not Available | Positive | 4255125 - 4256054 | 35574.4 |
| atp-binding cassette domain-containing protein | BvMPK_RS18010 | Not Available | Positive | 4256051 - 4256704 | 24548.9 |
| n-acetylglucosamine-6-phosphate deacetylase | BvMPK_RS18015 | Not Available | Negative | 4256928 - 4258091 | 42267.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

