Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | BvMPK_RS17925 | Not Available | Negative | 4234849 - 4236054 | 44559.1 |
| dihydrodipicolinate synthase family protein | BvMPK_RS17930 | Not Available | Positive | 4236360 - 4237274 | 33910.9 |
| age family epimerase/isomerase | BvMPK_RS17935 | Not Available | Positive | 4237287 - 4238483 | 46212.1 |
| mfs transporter | BvMPK_RS17940 | Not Available | Positive | 4238502 - 4239737 | 44685.5 |
| glucosamine-6-phosphate deaminase | BvMPK_RS17945 | Not Available | Positive | 4239783 - 4240574 | 29021.6 |
| glucosamine-6-phosphate deaminase | BvMPK_RS17950 | Not Available | Positive | 4240578 - 4242566 | 74771.3 |
| tigr02757 family protein | BvMPK_RS17955 | Not Available | Negative | 4242742 - 4243506 | 29921.8 |
| is110 family transposase | BvMPK_RS17960 | Not Available | Positive | 4243669 - 4244871 | 45885.7 |
| helix-turn-helix domain-containing protein | BvMPK_RS17965 | Not Available | Negative | 4245180 - 4246058 | 34389.8 |
| efflux rnd transporter periplasmic adaptor subunit | BvMPK_RS17970 | Not Available | Positive | 4246235 - 4247302 | 39261.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

