Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS01720 | Not Available | Negative | 424895 - 426471 | 56878.9 |
| tonb-dependent receptor | BvMPK_RS01725 | Not Available | Negative | 426508 - 429273 | 104480.0 |
| low specificity l-threonine aldolase | BvMPK_RS01730 | Not Available | Positive | 429439 - 430455 | 37852.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 430756 - 430866 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 430945 - 433835 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 433960 - 434033 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 434048 - 434124 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 434257 - 435789 | Not Available |
| helix-turn-helix transcriptional regulator | BvMPK_RS21490 | Not Available | Negative | 436257 - 436508 | 9736.26 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | BvMPK_RS01760 | Not Available | Positive | 436885 - 438060 | 43948.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

