Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | BvMPK_RS17330 | Not Available | Positive | 4093154 - 4093939 | 29317.4 |
| alpha-amylase family protein | BvMPK_RS17335 | Not Available | Positive | 4093956 - 4095653 | 64741.7 |
| hpaii family restriction endonuclease | BvMPK_RS17340 | Not Available | Negative | 4095782 - 4096870 | 41342.9 |
| hypothetical protein | BvMPK_RS22290 | Not Available | Positive | 4096973 - 4097212 | 9468.92 |
| linear amide c-n hydrolase | BvMPK_RS17345 | Not Available | Positive | 4097371 - 4098429 | 39405.4 |
| hypothetical protein | BvMPK_RS17350 | Not Available | Positive | 4098663 - 4099121 | 17637.3 |
| hsp20/alpha crystallin family protein | BvMPK_RS17355 | Not Available | Positive | 4099386 - 4099829 | 16943.0 |
| transposase | BvMPK_RS17360 | Not Available | Negative | 4100009 - 4101367 | 52916.8 |
| pas domain-containing protein | BvMPK_RS17365 | Not Available | Negative | 4101737 - 4104082 | 89757.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS17370 | Not Available | Negative | 4104297 - 4107517 | 118222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

