Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase rfba | BvMPK_RS17130 | Not Available | Positive | 4047828 - 4048715 | 32727.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BvMPK_RS17135 | Not Available | Positive | 4048715 - 4049284 | 21738.7 |
| wzz/fepe/etk n-terminal domain-containing protein | BvMPK_RS17140 | Not Available | Negative | 4049462 - 4050601 | 41526.8 |
| slbb domain-containing protein | BvMPK_RS17145 | Not Available | Negative | 4050609 - 4053101 | 92328.5 |
| xylose isomerase | BvMPK_RS17150 | Not Available | Negative | 4053341 - 4054657 | 49038.9 |
| xylulokinase | BvMPK_RS17155 | Not Available | Negative | 4054748 - 4056241 | 53461.6 |
| nrtr dna-binding winged helix domain-containing protein | BvMPK_RS17160 | Not Available | Negative | 4056413 - 4057147 | 28586.5 |
| response regulator transcription factor | BvMPK_RS17165 | Not Available | Positive | 4057503 - 4057868 | 14101.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS17170 | Not Available | Positive | 4057875 - 4059049 | 44723.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS17175 | Not Available | Positive | 4059086 - 4059948 | 32912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

