Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | BvMPK_RS16890 | Not Available | Negative | 4000420 - 4000812 | 14724.7 |
| type ii toxin-antitoxin system hica family toxin | BvMPK_RS16895 | Not Available | Negative | 4000852 - 4001040 | 6962.6 |
| winged helix-turn-helix domain-containing protein | BvMPK_RS16900 | Not Available | Negative | 4001195 - 4001398 | 7433.15 |
| c-gcaxxg-c-c family protein | BvMPK_RS16905 | Not Available | Negative | 4001555 - 4002058 | 18588.2 |
| d-2-hydroxyacid dehydrogenase | BvMPK_RS16910 | Not Available | Negative | 4002102 - 4003058 | 34358.8 |
| replication-associated recombination protein a | BvMPK_RS16915 | Not Available | Negative | 4003229 - 4004506 | 47220.9 |
| ynce family protein | BvMPK_RS16920 | Not Available | Positive | 4004747 - 4006822 | 78177.4 |
| hypothetical protein | BvMPK_RS16925 | Not Available | Positive | 4006854 - 4007930 | 39490.4 |
| duf4248 domain-containing protein | BvMPK_RS16930 | Not Available | Negative | 4008154 - 4008372 | 8477.25 |
| hypothetical protein | BvMPK_RS16935 | Not Available | Positive | 4008724 - 4009212 | 17535.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

