Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | BvMPK_RS16745 | Not Available | Positive | 3961370 - 3962968 | 60227.9 |
| aminopeptidase c | BvMPK_RS16750 | Not Available | Positive | 3963000 - 3964190 | 45290.6 |
| s9 family peptidase | BvMPK_RS16755 | Not Available | Positive | 3964321 - 3966552 | 84409.6 |
| capsule assembly wzi family protein | BvMPK_RS16760 | Not Available | Positive | 3966723 - 3968210 | 56304.0 |
| lipocalin-like domain-containing protein | BvMPK_RS16765 | Not Available | Positive | 3968269 - 3968649 | 14324.3 |
| hypothetical protein | BvMPK_RS22270 | Not Available | Positive | 3968621 - 3968926 | 11612.0 |
| aspartate ammonia-lyase | BvMPK_RS16770 | Not Available | Negative | 3968870 - 3970303 | 52225.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS16775 | Not Available | Negative | 3970567 - 3971456 | 32214.1 |
| lruc domain-containing protein | BvMPK_RS16780 | Not Available | Negative | 3971597 - 3973507 | 72638.4 |
| udp-glucose 4-epimerase gale | BvMPK_RS16785 | Not Available | Negative | 3973763 - 3974797 | 37984.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

