Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | BvMPK_RS16495 | Not Available | Positive | 3907351 - 3907914 | 20618.0 |
| rna-binding s4 domain-containing protein | BvMPK_RS16500 | Not Available | Positive | 3907914 - 3908342 | 16437.7 |
| transposase | BvMPK_RS16505 | Not Available | Positive | 3908533 - 3909891 | 52945.9 |
| hit family protein | BvMPK_RS16510 | Not Available | Negative | 3910124 - 3910549 | 16329.5 |
| cation:proton antiporter | BvMPK_RS16515 | Not Available | Negative | 3910574 - 3912841 | 84385.5 |
| glycine cleavage system aminomethyltransferase gcvt | BvMPK_RS16520 | Not Available | Negative | 3913047 - 3914132 | 39665.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS16525 | Not Available | Negative | 3914168 - 3915384 | 45012.8 |
| amidophosphoribosyltransferase | BvMPK_RS16530 | Not Available | Negative | 3915490 - 3916896 | 51992.8 |
| fluoride efflux transporter crcb | BvMPK_RS16535 | Not Available | Positive | 3916995 - 3917360 | 13306.7 |
| nigd-like protein | BvMPK_RS16540 | Not Available | Negative | 3917435 - 3918190 | 28138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

