Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c69 family dipeptidase | BvMPK_RS16395 | Not Available | Negative | 3887512 - 3889152 | 61160.6 |
| m23 family metallopeptidase | BvMPK_RS16400 | Not Available | Negative | 3889195 - 3890865 | 62671.9 |
| alanine dehydrogenase | BvMPK_RS16405 | Not Available | Positive | 3891059 - 3892150 | 38998.8 |
| twin-arginine translocase subunit tatc | BvMPK_RS16410 | Not Available | Negative | 3892237 - 3893067 | 32372.7 |
| twin-arginine translocase tata/tate family subunit | BvMPK_RS16415 | Not Available | Negative | 3893074 - 3893277 | 7276.18 |
| hypothetical protein | BvMPK_RS16420 | Not Available | Negative | 3893425 - 3893934 | 18481.4 |
| hypothetical protein | BvMPK_RS16425 | Not Available | Positive | 3894068 - 3894550 | 17559.9 |
| duf4010 domain-containing protein | BvMPK_RS16430 | Not Available | Positive | 3894628 - 3895917 | 48246.9 |
| yeih family protein | BvMPK_RS16435 | Not Available | Negative | 3896009 - 3896995 | 35078.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS16440 | Not Available | Negative | 3897084 - 3897979 | 34405.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

