Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6642 family protein | BvMPK_RS16105 | Not Available | Negative | 3818347 - 3818829 | 18578.2 |
| duf3223 domain-containing protein | BvMPK_RS16110 | Not Available | Negative | 3818979 - 3819614 | 24534.4 |
| hypothetical protein | BvMPK_RS16115 | Not Available | Negative | 3819611 - 3819820 | 7676.53 |
| hypothetical protein | BvMPK_RS16125 | Not Available | Positive | 3821324 - 3821623 | 10895.0 |
| zinc ribbon domain-containing protein | BvMPK_RS16130 | Not Available | Positive | 3822027 - 3822707 | 25849.5 |
| ydei family protein | BvMPK_RS16135 | Not Available | Positive | 3822843 - 3823409 | 22325.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22235 | Not Available | Positive | 3823553 - 3823886 | 12292.3 |
| p-loop ntpase fold protein | BvMPK_RS16145 | Not Available | Positive | 3823915 - 3825747 | 71706.4 |
| hypothetical protein | BvMPK_RS16150 | Not Available | Positive | 3825753 - 3826502 | 27652.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS16155 | Not Available | Positive | 3826487 - 3827903 | 51958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

