Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | BvMPK_RS01585 | Not Available | Positive | 399070 - 399429 | 13492.3 |
| duf4141 domain-containing protein | BvMPK_RS01590 | Not Available | Positive | 399443 - 400066 | 23213.9 |
| conjugative transposon protein traj | BvMPK_RS01595 | Not Available | Positive | 400105 - 401109 | 37128.6 |
| conjugative transposon protein trak | BvMPK_RS01600 | Not Available | Positive | 401131 - 401754 | 24150.1 |
| tral conjugative transposon family protein | BvMPK_RS01605 | Not Available | Positive | 401759 - 402028 | 10019.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01610 | Not Available | Positive | 402029 - 403425 | 51100.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01615 | Not Available | Positive | 403464 - 404401 | 34208.9 |
| conjugal transfer protein trao | BvMPK_RS01620 | Not Available | Positive | 404405 - 404986 | 21672.1 |
| duf3872 domain-containing protein | BvMPK_RS01625 | Not Available | Positive | 405009 - 405467 | 17672.0 |
| hypothetical protein | BvMPK_RS01630 | Not Available | Positive | 405454 - 406002 | 21462.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

