Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6363 domain-containing protein | BvMPK_RS15785 | Not Available | Negative | 3741668 - 3742153 | 19060.4 |
| abi family protein | BvMPK_RS15795 | Not Available | Positive | 3742604 - 3743320 | 27943.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22215 | Not Available | Positive | 3743444 - 3744672 | 46368.2 |
| tir domain-containing protein | BvMPK_RS15815 | Not Available | Negative | 3744755 - 3749392 | 181374.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3749417 - 3749529 | Not Available |
| helix-turn-helix transcriptional regulator | BvMPK_RS15825 | Not Available | Negative | 3749695 - 3751430 | 64425.6 |
| wadjet anti-phage system protein jetd domain-containing protein | BvMPK_RS15830 | Not Available | Negative | 3751451 - 3752617 | 44987.2 |
| atp-binding protein | BvMPK_RS15835 | Not Available | Negative | 3752614 - 3756009 | 132245.0 |
| duf4194 domain-containing protein | BvMPK_RS15840 | Not Available | Negative | 3755984 - 3756568 | 22409.8 |
| duf3375 domain-containing protein | BvMPK_RS15845 | Not Available | Negative | 3756565 - 3758013 | 56549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

