Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS15110 | Not Available | Negative | 3582524 - 3584943 | 89682.4 |
| abc transporter atp-binding protein | BvMPK_RS15115 | Not Available | Negative | 3584943 - 3585653 | 26435.0 |
| efflux rnd transporter periplasmic adaptor subunit | BvMPK_RS15120 | Not Available | Negative | 3585667 - 3586917 | 47799.6 |
| tolc family protein | BvMPK_RS15125 | Not Available | Negative | 3586923 - 3588230 | 50704.1 |
| sigma-54 dependent transcriptional regulator | BvMPK_RS15130 | Not Available | Positive | 3588562 - 3589893 | 50257.9 |
| pas domain-containing sensor histidine kinase | BvMPK_RS15135 | Not Available | Positive | 3589899 - 3591221 | 50270.6 |
| carbon-nitrogen hydrolase family protein | BvMPK_RS15140 | Not Available | Negative | 3591348 - 3592880 | 59325.0 |
| glutamine synthetase family protein | BvMPK_RS15145 | Not Available | Positive | 3593086 - 3594588 | 56034.0 |
| Trna-gly | Not Available | Not Available | Positive | 3594709 - 3594784 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3594797 - 3594880 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

