Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS15010 | Not Available | Negative | 3562869 - 3563084 | 8263.1 |
| hypothetical protein | BvMPK_RS15015 | Not Available | Negative | 3563124 - 3563570 | 16817.7 |
| vape domain-containing protein | BvMPK_RS15020 | Not Available | Positive | 3563699 - 3565963 | 86627.8 |
| duf4248 domain-containing protein | BvMPK_RS22160 | Not Available | Positive | 3566143 - 3566349 | 7750.23 |
| dna-binding domain-containing protein | BvMPK_RS15030 | Not Available | Positive | 3566636 - 3567142 | 18460.0 |
| n-acetylmuramoyl-l-alanine amidase | BvMPK_RS15035 | Not Available | Positive | 3567240 - 3567845 | 23255.8 |
| glycosyltransferase family 1 protein | BvMPK_RS15040 | Not Available | Negative | 3568186 - 3569331 | 44751.8 |
| o-antigen ligase | BvMPK_RS15045 | Not Available | Negative | 3569367 - 3570713 | 51084.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS15050 | Not Available | Negative | 3570730 - 3571865 | 43374.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS15055 | Not Available | Negative | 3571889 - 3572871 | 36748.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

