Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS14910 | Not Available | Positive | 3534324 - 3534524 | 7870.84 |
| aaa family atpase | BvMPK_RS14915 | Not Available | Positive | 3534528 - 3536300 | 69025.0 |
| sigma-54 dependent transcriptional regulator | BvMPK_RS14920 | Not Available | Positive | 3536337 - 3537677 | 50167.7 |
| pas domain-containing sensor histidine kinase | BvMPK_RS14925 | Not Available | Positive | 3537793 - 3539094 | 48986.9 |
| exodeoxyribonuclease v subunit beta | BvMPK_RS14930 | Not Available | Positive | 3539175 - 3542351 | 122565.0 |
| pd-(d/e)xk nuclease family protein | BvMPK_RS14935 | Not Available | Positive | 3542351 - 3545230 | 110970.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS14940 | Not Available | Negative | 3545305 - 3546131 | 31021.6 |
| replicative dna helicase | BvMPK_RS14945 | Not Available | Positive | 3546393 - 3547949 | 57459.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS14950 | Not Available | Positive | 3548103 - 3550564 | 88056.1 |
| yebc/pmpr family dna-binding transcriptional regulator | BvMPK_RS14955 | Not Available | Positive | 3550598 - 3551338 | 27834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

