Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | BvMPK_RS14675 | Not Available | Positive | 3478436 - 3479155 | 27401.5 |
| serine hydroxymethyltransferase | BvMPK_RS14680 | Not Available | Positive | 3479400 - 3480680 | 46829.6 |
| mate family efflux transporter | BvMPK_RS14685 | Not Available | Positive | 3480877 - 3482220 | 49290.3 |
| ompa family protein | BvMPK_RS14690 | Not Available | Positive | 3482269 - 3482988 | 24484.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | BvMPK_RS14695 | Not Available | Positive | 3483117 - 3483839 | 27910.3 |
| n-acetylmuramoyl-l-alanine amidase-like domain-containing protein | BvMPK_RS14700 | Not Available | Negative | 3483811 - 3484695 | 33269.5 |
| biotin/lipoyl-binding protein | BvMPK_RS14705 | Not Available | Negative | 3484821 - 3486596 | 66738.8 |
| rna polymerase sigma factor | BvMPK_RS14710 | Not Available | Negative | 3486785 - 3487288 | 19667.6 |
| trimeric intracellular cation channel family protein | BvMPK_RS14715 | Not Available | Negative | 3487447 - 3488061 | 22186.8 |
| udp-n-acetyl glucosamine 2-epimerase | BvMPK_RS14720 | Not Available | Positive | 3488145 - 3489233 | 40245.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

