Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | BvMPK_RS14380 | Not Available | Positive | 3413089 - 3414387 | 50104.2 |
| hu family dna-binding protein | BvMPK_RS14385 | Not Available | Positive | 3414461 - 3414733 | 10202.5 |
| hu family dna-binding protein | BvMPK_RS14390 | Not Available | Positive | 3414759 - 3416189 | 52640.7 |
| moxr family atpase | BvMPK_RS14395 | Not Available | Positive | 3416474 - 3417469 | 37374.8 |
| duf58 domain-containing protein | BvMPK_RS14400 | Not Available | Positive | 3417719 - 3418588 | 33730.5 |
| batd family protein | BvMPK_RS14405 | Not Available | Positive | 3418594 - 3419691 | 41586.1 |
| vwa domain-containing protein | BvMPK_RS14410 | Not Available | Positive | 3419711 - 3420709 | 37254.6 |
| vwa domain-containing protein | BvMPK_RS14415 | Not Available | Positive | 3420721 - 3421743 | 37851.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS14420 | Not Available | Positive | 3421753 - 3422459 | 27533.2 |
| batd family protein | BvMPK_RS14425 | Not Available | Positive | 3422499 - 3424334 | 67725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

