Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 20 protein | BvMPK_RS14200 | Not Available | Positive | 3374152 - 3376473 | 87122.3 |
| rna-binding protein | BvMPK_RS14205 | Not Available | Negative | 3376657 - 3376902 | 9169.97 |
| ferredoxin domain-containing protein | BvMPK_RS14210 | Not Available | Positive | 3377195 - 3377725 | 19120.2 |
| cof-type had-iib family hydrolase | BvMPK_RS14215 | Not Available | Negative | 3377715 - 3378521 | 30346.9 |
| dna recombination protein rmuc | BvMPK_RS14220 | Not Available | Positive | 3378617 - 3379852 | 46960.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS14225 | Not Available | Positive | 3379870 - 3380537 | 25194.7 |
| sensor histidine kinase | BvMPK_RS14230 | Not Available | Negative | 3380608 - 3382077 | 55121.1 |
| histidine kinase | BvMPK_RS14235 | Not Available | Negative | 3382090 - 3383217 | 42637.1 |
| duf5131 family protein | BvMPK_RS14240 | Not Available | Negative | 3383397 - 3384164 | 29868.6 |
| nudix hydrolase | BvMPK_RS14245 | Not Available | Positive | 3384370 - 3384924 | 21545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

