Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuok | BvMPK_RS01410 | Not Available | Positive | 366733 - 367041 | 11758.6 |
| nadh-quinone oxidoreductase subunit l | BvMPK_RS01415 | Not Available | Positive | 367044 - 368945 | 70360.2 |
| nuom family protein | BvMPK_RS01420 | Not Available | Positive | 368999 - 370480 | 53794.6 |
| nadh-quinone oxidoreductase subunit n | BvMPK_RS01425 | Not Available | Positive | 370511 - 371932 | 52272.5 |
| glycoside hydrolase family 88 protein | BvMPK_RS01430 | Not Available | Positive | 372108 - 373334 | 46630.1 |
| hamp domain-containing sensor histidine kinase | BvMPK_RS01435 | Not Available | Negative | 373336 - 373578 | 8923.97 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22465 | Not Available | Negative | 373727 - 373804 | 2744.45 |
| glycoside hydrolase family 28 protein | BvMPK_RS01440 | Not Available | Positive | 374013 - 375419 | 52445.8 |
| gtp-binding protein | BvMPK_RS01445 | Not Available | Negative | 375483 - 376733 | 47708.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01450 | Not Available | Positive | 376882 - 378208 | 50011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

