Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS13960 | Not Available | Negative | 3315047 - 3317386 | 88612.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13965 | Not Available | Negative | 3317448 - 3318113 | 24550.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13970 | Not Available | Negative | 3318133 - 3320531 | 91209.8 |
| abc transporter permease | BvMPK_RS13975 | Not Available | Negative | 3320552 - 3322921 | 90175.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13980 | Not Available | Negative | 3322935 - 3325330 | 91373.9 |
| efflux rnd transporter periplasmic adaptor subunit | BvMPK_RS13985 | Not Available | Negative | 3325341 - 3326591 | 48108.4 |
| tolc family protein | BvMPK_RS13990 | Not Available | Negative | 3326674 - 3328143 | 55871.3 |
| tetratricopeptide repeat protein | BvMPK_RS13995 | Not Available | Negative | 3328192 - 3329115 | 34904.6 |
| sigma-54 dependent transcriptional regulator | BvMPK_RS14000 | Not Available | Positive | 3329339 - 3330706 | 51877.1 |
| pas domain-containing sensor histidine kinase | BvMPK_RS14005 | Not Available | Positive | 3330703 - 3332034 | 50551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

