Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 3224741 - 3224816 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3224834 - 3224909 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3224931 - 3225006 | Not Available |
| mbl fold metallo-hydrolase | BvMPK_RS13575 | Not Available | Negative | 3225095 - 3225898 | 29870.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13580 | Not Available | Negative | 3226052 - 3227013 | 36810.9 |
| peroxiredoxin | BvMPK_RS13585 | Not Available | Positive | 3227195 - 3228394 | 46075.1 |
| glucuronate isomerase | BvMPK_RS13590 | Not Available | Negative | 3228483 - 3229889 | 54309.7 |
| tagaturonate reductase | BvMPK_RS13595 | Not Available | Positive | 3230215 - 3231654 | 53907.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22105 | Not Available | Positive | 3231756 - 3232109 | 13429.0 |
| is21 family transposase | BvMPK_RS13600 | Not Available | Positive | 3232198 - 3233796 | 61518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

