Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | BvMPK_RS13410 | Not Available | Positive | 3189466 - 3190479 | 38665.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13415 | Not Available | Negative | 3190646 - 3192674 | 71229.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13420 | Not Available | Positive | 3192840 - 3193660 | 31076.1 |
| dna-directed rna polymerase subunit omega | BvMPK_RS13425 | Not Available | Positive | 3193677 - 3194012 | 12965.3 |
| duf4293 domain-containing protein | BvMPK_RS13430 | Not Available | Positive | 3194262 - 3194714 | 16883.5 |
| porin family protein | BvMPK_RS13435 | Not Available | Negative | 3194798 - 3195481 | 25699.9 |
| lysm peptidoglycan-binding domain-containing protein | BvMPK_RS13440 | Not Available | Negative | 3195481 - 3197289 | 68546.0 |
| excinuclease abc subunit uvra | BvMPK_RS13445 | Not Available | Positive | 3197444 - 3200272 | 105894.0 |
| cys-trna(pro) deacylase | BvMPK_RS13450 | Not Available | Positive | 3200287 - 3200772 | 17802.8 |
| peptide mfs transporter | BvMPK_RS13455 | Not Available | Positive | 3200879 - 3202540 | 59851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

