Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS13360 | Not Available | Positive | 3179122 - 3179892 | 29901.7 |
| hypothetical protein | BvMPK_RS13365 | Not Available | Positive | 3180477 - 3180719 | 9001.03 |
| duf6722 family protein | BvMPK_RS13370 | Not Available | Positive | 3180860 - 3181105 | 9360.5 |
| duf4286 family protein | BvMPK_RS13375 | Not Available | Positive | 3181646 - 3181951 | 11925.3 |
| crossover junction endodeoxyribonuclease ruvc | BvMPK_RS13380 | Not Available | Positive | 3181948 - 3182517 | 21117.3 |
| type i pullulanase | BvMPK_RS13385 | Not Available | Positive | 3182522 - 3184516 | 74625.4 |
| mannonate dehydratase | BvMPK_RS13390 | Not Available | Positive | 3184574 - 3185752 | 44763.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13395 | Not Available | Negative | 3185735 - 3187944 | 77821.1 |
| 3'-5' exonuclease | BvMPK_RS13400 | Not Available | Positive | 3188152 - 3188640 | 18589.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS13405 | Not Available | Positive | 3188674 - 3189275 | 23098.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

