Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | BvMPK_RS01310 | Not Available | Positive | 341083 - 342405 | 49800.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS22460 | Not Available | Positive | 342520 - 344119 | 57781.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS01320 | Not Available | Positive | 344382 - 345110 | 27780.6 |
| sgnh/gdsl hydrolase family protein | BvMPK_RS01325 | Not Available | Negative | 345246 - 345941 | 26655.1 |
| glycoside hydrolase family 28 protein | BvMPK_RS01330 | Not Available | Positive | 346154 - 347938 | 66033.3 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BvMPK_RS01335 | Not Available | Positive | 348215 - 351103 | 108936.0 |
| glycoside hydrolase family 28 protein | BvMPK_RS01340 | Not Available | Positive | 351145 - 352449 | 49114.7 |
| duf4858 domain-containing protein | BvMPK_RS01345 | Not Available | Negative | 352601 - 353164 | 21541.2 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | BvMPK_RS01350 | Not Available | Negative | 353254 - 355719 | 92858.0 |
| gscfa domain-containing protein | BvMPK_RS01355 | Not Available | Negative | 355695 - 356681 | 38641.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

